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| 29.09.2012 | 13:30 | Hansa Rostock | - | VfL Osnabrück | 0:3 (0:0) | |
| 14:00 | SV Babelsberg 03 | - | 1. FC Saarbrücken | 0:1 (0:0) | ||
| 14:00 | Rot-Weiß Erfurt | - | Wacker Burghausen | 0:3 (0:1) | ||
| 14:00 | 1. FC Heidenheim 1846 | - | Hallescher FC | 3:1 (0:0) | ||
| 14:00 | SV Wehen Wiesbaden | - | VfB Stuttgart II | 0:0 (0:0) | ||
| 14:00 | SV Darmstadt 98 | - | Arminia Bielefeld | 1:3 (0:1) | ||
| 14:00 | Chemnitzer FC | - | Alemannia Aachen | 1:2 (0:0) | ||
| 14:00 | Preußen Münster | - | Borussia Dortmund II | 1:0 (0:0) | ||
| 30.09.2012 | 14:00 | SpVgg Unterhaching | - | Kickers Offenbach | 0:3 (0:2) | |
| 24.10.2012 | 18:00 | Stuttgarter Kickers | - | Karlsruher SC | 0:2 (0:1) |
| # | Team | GS. | W. | G. | V. | Dp. | Ds. | P. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Preußen Münster | 12 | 8 | 3 | 1 | 23:8 | 15 | 27 |
| 2 |
|
VfL Osnabrück | 12 | 8 | 1 | 3 | 16:7 | 9 | 25 |
| 3 |
|
SpVgg Unterhaching | 12 | 8 | 1 | 3 | 24:18 | 6 | 25 |
| 4 |
|
Arminia Bielefeld | 12 | 7 | 3 | 2 | 20:13 | 7 | 24 |
| 5 |
|
1. FC Heidenheim 1846 | 12 | 6 | 3 | 3 | 23:19 | 4 | 21 |
| 6 |
|
Wacker Burghausen | 12 | 6 | 1 | 5 | 17:14 | 3 | 19 |
| 7 |
|
Hansa Rostock | 12 | 5 | 3 | 4 | 16:18 | -2 | 18 |
| 8 |
|
Karlsruher SC | 12 | 4 | 5 | 3 | 16:9 | 7 | 17 |
| 9 |
|
Kickers Offenbach | 12 | 5 | 3 | 4 | 19:14 | 5 | 16 |
| 10 |
|
1. FC Saarbrücken | 12 | 5 | 1 | 6 | 16:19 | -3 | 16 |
| 11 |
|
Chemnitzer FC | 12 | 4 | 3 | 5 | 13:14 | -1 | 15 |
|
VfB Stuttgart II | 12 | 4 | 3 | 5 | 13:14 | -1 | 15 | |
| 13 |
|
Hallescher FC | 12 | 3 | 5 | 4 | 10:12 | -2 | 14 |
| 14 |
|
Stuttgarter Kickers | 12 | 3 | 3 | 6 | 14:15 | -1 | 12 |
| 15 |
|
SV Wehen Wiesbaden | 12 | 1 | 9 | 2 | 13:14 | -1 | 12 |
| 16 |
|
SV Babelsberg 03 | 12 | 3 | 2 | 7 | 9:16 | -7 | 11 |
| 17 |
|
SV Darmstadt 98 | 12 | 2 | 4 | 6 | 11:18 | -7 | 10 |
| 18 |
|
Rot-Weiß Erfurt | 12 | 2 | 3 | 7 | 11:22 | -11 | 9 |
| 19 |
|
Alemannia Aachen | 12 | 3 | 4 | 5 | 14:19 | -5 | 8 |
| 20 |
|
Borussia Dortmund II | 12 | 1 | 4 | 7 | 9:24 | -15 | 7 |
| Promotie | |
| Promotie en degradatie | |
| Degradatie | |
| Degradatie |
