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| 03.05.2013 | 18:00 | Dynamo Dresden | - | SC Paderborn 07 | 2:1 (1:1) | |
| 18:00 | Hertha BSC | - | Erzgebirge Aue | 3:2 (3:0) | ||
| 18:00 | VfR Aalen | - | Jahn Regensburg | 2:1 (1:1) | ||
| 04.05.2013 | 13:00 | VfL Bochum | - | 1. FC Köln | 2:1 (0:1) | |
| 13:00 | SV Sandhausen | - | FC Ingolstadt 04 | 3:1 (1:1) | ||
| 05.05.2013 | 13:30 | MSV Duisburg | - | FC St. Pauli | 0:0 (0:0) | |
| 13:30 | TSV 1860 München | - | 1. FC Union Berlin | 3:0 (2:0) | ||
| 13:30 | 1. FC Kaiserslautern | - | FSV Frankfurt | 4:1 (4:0) | ||
| 06.05.2013 | 20:15 | Eintracht Braunschweig | - | Energie Cottbus | 0:0 (0:0) |
| # | Team | GS. | W. | G. | V. | Dp. | Ds. | P. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Hertha BSC | 32 | 21 | 9 | 2 | 62:26 | 36 | 72 |
| 2 |
|
Eintracht Braunschweig | 32 | 19 | 9 | 4 | 49:27 | 22 | 66 |
| 3 |
|
1. FC Kaiserslautern | 32 | 14 | 13 | 5 | 51:30 | 21 | 55 |
| 4 |
|
1. FC Köln | 32 | 13 | 12 | 7 | 39:31 | 8 | 51 |
| 5 |
|
FSV Frankfurt | 32 | 15 | 5 | 12 | 51:42 | 9 | 50 |
| 6 |
|
TSV 1860 München | 32 | 11 | 13 | 8 | 36:29 | 7 | 46 |
| 7 |
|
Energie Cottbus | 32 | 11 | 11 | 10 | 37:35 | 2 | 44 |
| 8 |
|
VfR Aalen | 32 | 11 | 10 | 11 | 37:36 | 1 | 43 |
| 9 |
|
1. FC Union Berlin | 32 | 11 | 10 | 11 | 46:47 | -1 | 43 |
| 10 |
|
MSV Duisburg | 32 | 10 | 10 | 12 | 33:45 | -12 | 40 |
| 11 |
|
SC Paderborn 07 | 32 | 10 | 9 | 13 | 41:42 | -1 | 39 |
| 12 |
|
FC Ingolstadt 04 | 32 | 9 | 12 | 11 | 35:40 | -5 | 39 |
| 13 |
|
VfL Bochum | 32 | 10 | 8 | 14 | 38:48 | -10 | 38 |
| 14 |
|
FC St. Pauli | 32 | 9 | 10 | 13 | 37:45 | -8 | 37 |
| 15 |
|
Erzgebirge Aue | 32 | 8 | 10 | 14 | 38:45 | -7 | 34 |
| 16 |
|
Dynamo Dresden | 32 | 8 | 10 | 14 | 32:45 | -13 | 34 |
| 17 |
|
SV Sandhausen | 32 | 6 | 8 | 18 | 38:62 | -24 | 26 |
| 18 |
|
Jahn Regensburg | 32 | 4 | 7 | 21 | 34:59 | -25 | 19 |
| Promotie | |
| Promotie en degradatie | |
| Degradatie | |
| Promotie en degradatie | |
| Degradatie |
